The affairs of the Association are conducted entirely by the Council. The Council is the governing body and the highest policy making organ of the Association. The Council is empowered to appoint such committee or co-opt persons as it may deem expedient for the smooth running of the Association. Every member organization has representatives in the Council.
The Secretariat of the Association is located at the Lagos State Development and Property Corporation, LSDPC Headquarters at No 2, Town Planning Way, Ilupeju, Lagos. The Secretariat is headed by an Executive Secretary who reports to the Secretary General.